Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 IGHEP1-201ENST00000521393 651 ntBASIC15.84■□□□□ 0.13
LOC285556D6RIA3 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 AL356740.1-201ENST00000602192 1297 ntBASIC15.84■□□□□ 0.13
LOC285556D6RIA3 AL357143.1-203ENST00000639750 881 ntBASIC15.84■□□□□ 0.13
LOC285556D6RIA3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 FAM45BP-202ENST00000592932 1624 ntBASIC15.84■□□□□ 0.13
LOC285556D6RIA3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.84■□□□□ 0.13
LOC285556D6RIA3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.83■□□□□ 0.13
LOC285556D6RIA3 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.83■□□□□ 0.13
LOC285556D6RIA3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LOC285556D6RIA3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LOC285556D6RIA3 GUCY2EP-203ENST00000531117 1918 ntBASIC15.83■□□□□ 0.13
LOC285556D6RIA3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LOC285556D6RIA3 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.83■□□□□ 0.13
LOC285556D6RIA3 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 AL137244.1-201ENST00000422931 865 ntBASIC15.83■□□□□ 0.12
LOC285556D6RIA3 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 RPL29P2-201ENST00000488409 460 ntBASIC15.83■□□□□ 0.12
LOC285556D6RIA3 AC004923.3-201ENST00000527532 355 ntBASIC15.83■□□□□ 0.12
LOC285556D6RIA3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 RN7SL605P-201ENST00000577229 281 ntBASIC15.83■□□□□ 0.12
LOC285556D6RIA3 MIR4254-201ENST00000581063 76 ntBASIC15.83■□□□□ 0.12
LOC285556D6RIA3 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 AF013593.1-201ENST00000458074 1487 ntBASIC15.83■□□□□ 0.12
LOC285556D6RIA3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.83■□□□□ 0.12
LOC285556D6RIA3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 AC015818.1-201ENST00000451011 244 ntBASIC15.82■□□□□ 0.12
LOC285556D6RIA3 CDK4P1-201ENST00000454213 828 ntBASIC15.82■□□□□ 0.12
LOC285556D6RIA3 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 AC016582.2-202ENST00000587765 1094 ntBASIC15.82■□□□□ 0.12
LOC285556D6RIA3 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 AC080013.5-201ENST00000607044 679 ntBASIC15.82■□□□□ 0.12
LOC285556D6RIA3 AC005746.3-201ENST00000614751 393 ntBASIC15.82■□□□□ 0.12
LOC285556D6RIA3 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15.82■□□□□ 0.12
LOC285556D6RIA3 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms