Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PPARGC1AQ9UBK2 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC004899.1-201ENST00000424687 1714 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC144522.1-201ENST00000625111 1658 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AL031595.1-201ENST00000623969 4709 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC006033.1-201ENST00000440505 426 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 SERPINA13P-202ENST00000478994 924 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC005586.2-201ENST00000563946 837 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 RN7SL163P-201ENST00000583100 276 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AL022328.3-201ENST00000607943 679 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC004923.1-202ENST00000642106 209 ntBASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PPARGC1AQ9UBK2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 RN7SL832P-201ENST00000607781 1756 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 DPM3-202ENST00000368399 517 ntBASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.03■□□□□ -0
PPARGC1AQ9UBK2 VDAC1P1-201ENST00000439229 848 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms