Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 BNIP3P41-202ENST00000616656 861 ntBASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 AL122018.1-201ENST00000446607 2310 ntBASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 AC020910.6-201ENST00000623084 1459 ntBASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 FAM90A7P-201ENST00000382628 1395 ntBASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 FAM90A23P-201ENST00000400136 1395 ntBASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 HLA-J-204ENST00000495278 958 ntBASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 AC044849.1-201ENST00000519737 1188 ntBASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 AC133540.1-201ENST00000620845 1019 ntBASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 AC068587.8-201ENST00000641239 219 ntBASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 AC004923.1-202ENST00000642106 209 ntBASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.98□□□□□ -0.17
CUEDC1Q9NWM3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 DPM3-202ENST00000368399 517 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 KRT18P36-201ENST00000411618 1276 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 NKAIN1P1-201ENST00000435754 582 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 ST13P19-201ENST00000442505 1124 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms