Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.24■□□□□ 0.03
CD248Q9HCU0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 AC138627.1-207ENST00000641560 1006 ntBASIC15.24■□□□□ 0.03
CD248Q9HCU0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.24■□□□□ 0.03
CD248Q9HCU0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 AC020658.7-201ENST00000624274 2442 ntBASIC15.24■□□□□ 0.03
CD248Q9HCU0 AL157414.3-201ENST00000624276 1954 ntBASIC15.24■□□□□ 0.03
CD248Q9HCU0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 AC007326.2-201ENST00000624224 7579 ntBASIC15.23■□□□□ 0.03
CD248Q9HCU0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.23■□□□□ 0.03
CD248Q9HCU0 GHSR-202ENST00000427970 912 ntBASIC15.23■□□□□ 0.03
CD248Q9HCU0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 NDUFV2P1-201ENST00000596415 907 ntBASIC15.23■□□□□ 0.03
CD248Q9HCU0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.23■□□□□ 0.03
CD248Q9HCU0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD248Q9HCU0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms