Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MEG3_2.1-201ENST00000611456 105 ntBASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 FMO6P-201ENST00000236166 1620 ntBASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 BRD7P5-201ENST00000299197 1822 ntBASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.59□□□□□ -0.07
SHROOM3Q8TF72 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 RN7SL720P-201ENST00000488178 304 ntBASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 AL512310.5-201ENST00000551999 515 ntBASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 AL132994.2-201ENST00000603120 687 ntBASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHROOM3Q8TF72 KRT8P29-201ENST00000420409 1371 ntBASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 AC067931.2-201ENST00000623655 2003 ntBASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 AL591122.2-201ENST00000624125 1853 ntBASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 AC069218.1-201ENST00000435269 762 ntBASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHROOM3Q8TF72 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 LINC00115-201ENST00000473798 1317 ntBASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 AC073869.1-201ENST00000415574 2762 ntBASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 AC005014.1-201ENST00000432006 2976 ntBASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 AC104073.2-201ENST00000453737 312 ntBASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SHROOM3Q8TF72 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms