Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.29□□□□□ -0.12
RFWD2Q8NHY2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 MIR770-201ENST00000390219 98 ntBASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AL391647.1-201ENST00000395664 511 ntBASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AP001582.1-201ENST00000525856 295 ntBASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 SRD5A3P1-201ENST00000603021 949 ntBASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AC020910.5-201ENST00000623668 1865 ntBASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 AL603764.1-201ENST00000636452 321 ntBASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RFWD2Q8NHY2 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 AL359845.1-201ENST00000458202 1648 ntBASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 POM121L14P-201ENST00000406100 1558 ntBASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 VENTXP1-201ENST00000569334 2716 ntBASIC14.27□□□□□ -0.12
RFWD2Q8NHY2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 AC114812.1-204ENST00000449669 728 ntBASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 AC104794.3-201ENST00000566840 1248 ntBASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 AC007431.3-201ENST00000623221 587 ntBASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFWD2Q8NHY2 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms