Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC105424.1-201ENST00000514583 209 ntBASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 RCC2P1-201ENST00000452257 1476 ntBASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 CACYBPP3-201ENST00000406011 625 ntBASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 HNRNPA1P11-201ENST00000580106 956 ntBASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 AC099552.4-201ENST00000624248 949 ntBASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 AC022532.1-201ENST00000624563 1728 ntBASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL22A1Q8NFW1 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 PRDX3P2-201ENST00000447051 611 ntBASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 MIR3940-201ENST00000579148 102 ntBASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COL22A1Q8NFW1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 ATF4P4-201ENST00000393544 1930 ntBASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 HMGN1P4-201ENST00000419500 290 ntBASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 PTPA-219ENST00000435305 530 ntTSL 2 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 FOS-205ENST00000555242 629 ntTSL 2 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 KRT18P8-201ENST00000581937 1246 ntBASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 AP000553.2-201ENST00000609038 441 ntBASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL22A1Q8NFW1 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms