Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AC106760.1-201ENST00000508690 800 ntBASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AL033527.5-201ENST00000641382 801 ntBASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 PCDHA6-201ENST00000378126 3267 ntBASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BBS1Q8NFJ9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms