Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 GMFG-209ENST00000600322 622 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 NPY2R-202ENST00000506608 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 RN7SL258P-201ENST00000478664 300 ntBASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 MON2-212ENST00000552115 3760 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 STAT1-212ENST00000540176 4216 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 AC078991.1-201ENST00000437297 610 ntBASIC4.5□□□□□ -1.69
SYNE1Q8NF91 VDAC1P1-201ENST00000439229 848 ntBASIC4.5□□□□□ -1.69
SYNE1Q8NF91 PUDPP3-201ENST00000445368 636 ntBASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CD164-210ENST00000512821 964 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 AC020922.3-201ENST00000595064 547 ntBASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 FKBP4P6-201ENST00000457486 1332 ntBASIC4.5□□□□□ -1.69
SYNE1Q8NF91 MBLAC2-202ENST00000514906 1936 ntBASIC4.5□□□□□ -1.69
SYNE1Q8NF91 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 SHC1P1-201ENST00000425230 1745 ntBASIC4.5□□□□□ -1.69
SYNE1Q8NF91 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE1Q8NF91 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 AL133466.1-201ENST00000447582 150 ntBASIC4.49□□□□□ -1.69
SYNE1Q8NF91 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE1Q8NF91 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms