Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 ANKRD26P1-203ENST00000569528 966 ntBASIC17.67■□□□□ 0.42
RC3H1Q5TC82 KRT8P34-201ENST00000577607 1044 ntBASIC17.67■□□□□ 0.42
RC3H1Q5TC82 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 PRMT1P1-201ENST00000604252 1009 ntBASIC17.67■□□□□ 0.42
RC3H1Q5TC82 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RC3H1Q5TC82 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AC105917.1-201ENST00000506637 2539 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 SNORA57-201ENST00000383870 149 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AC079250.1-201ENST00000456046 531 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 HNRNPA3P6-201ENST00000472163 1006 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 FAM187B2P-201ENST00000577135 713 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 MIR4254-201ENST00000581063 76 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AC048382.6-201ENST00000621980 1223 ntBASIC17.66■□□□□ 0.42
RC3H1Q5TC82 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RC3H1Q5TC82 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 EEF1DP5-201ENST00000431410 772 ntBASIC17.65■□□□□ 0.42
RC3H1Q5TC82 AC005722.1-201ENST00000431878 964 ntBASIC17.65■□□□□ 0.42
RC3H1Q5TC82 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 AC006116.2-201ENST00000589958 988 ntBASIC17.65■□□□□ 0.42
RC3H1Q5TC82 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RC3H1Q5TC82 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.65■□□□□ 0.42
RC3H1Q5TC82 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms