Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 GPS2P2-201ENST00000430745 888 ntBASIC13.15□□□□□ -0.3
RBM48Q5RL73 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 MTDHP5-201ENST00000598980 586 ntBASIC13.15□□□□□ -0.3
RBM48Q5RL73 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.15□□□□□ -0.3
RBM48Q5RL73 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RBM48Q5RL73 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RBM48Q5RL73 AC012531.1-201ENST00000562848 2680 ntBASIC13.15□□□□□ -0.31
RBM48Q5RL73 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.15□□□□□ -0.31
RBM48Q5RL73 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.15□□□□□ -0.31
RBM48Q5RL73 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 AC022364.1-202ENST00000617468 2409 ntBASIC13.14□□□□□ -0.31
RBM48Q5RL73 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 ARSEP1-201ENST00000420443 635 ntBASIC13.14□□□□□ -0.31
RBM48Q5RL73 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 LINC02084-201ENST00000606069 1096 ntBASIC13.14□□□□□ -0.31
RBM48Q5RL73 AL596442.2-201ENST00000610240 980 ntBASIC13.14□□□□□ -0.31
RBM48Q5RL73 BX088702.1-201ENST00000610784 235 ntBASIC13.14□□□□□ -0.31
RBM48Q5RL73 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RBM48Q5RL73 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.14□□□□□ -0.31
RBM48Q5RL73 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RBM48Q5RL73 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.13□□□□□ -0.31
RBM48Q5RL73 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RBM48Q5RL73 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms