Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COBLL1Q53SF7 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.7■□□□□ 0.1
COBLL1Q53SF7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COBLL1Q53SF7 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.7■□□□□ 0.1
COBLL1Q53SF7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COBLL1Q53SF7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COBLL1Q53SF7 AC097376.2-205ENST00000610159 5334 ntBASIC15.7■□□□□ 0.1
COBLL1Q53SF7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COBLL1Q53SF7 AL591122.2-201ENST00000624125 1853 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AL137784.3-201ENST00000623858 2288 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 BTBD6P1-201ENST00000412176 1267 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AL591846.1-201ENST00000451736 433 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AC009779.1-201ENST00000551138 283 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AL132994.2-201ENST00000603120 687 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 MIR6805-201ENST00000615055 62 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AC004923.1-202ENST00000642106 209 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 OR2I1P-209ENST00000641730 5365 ntBASIC15.69■□□□□ 0.1
COBLL1Q53SF7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COBLL1Q53SF7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 PPT1-213ENST00000641319 2388 ntBASIC15.68■□□□□ 0.1
COBLL1Q53SF7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 DPM3-202ENST00000368399 517 ntBASIC15.68■□□□□ 0.1
COBLL1Q53SF7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 MIR3615-201ENST00000581999 87 ntBASIC15.68■□□□□ 0.1
COBLL1Q53SF7 RN7SL163P-201ENST00000583100 276 ntBASIC15.68■□□□□ 0.1
COBLL1Q53SF7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 AC017083.2-201ENST00000608069 979 ntBASIC15.68■□□□□ 0.1
COBLL1Q53SF7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COBLL1Q53SF7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms