Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRICKLE4Q2TBC4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRICKLE4Q2TBC4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.33□□□□□ -0.27
PRICKLE4Q2TBC4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
PRICKLE4Q2TBC4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.33□□□□□ -0.27
PRICKLE4Q2TBC4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRICKLE4Q2TBC4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PRICKLE4Q2TBC4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRICKLE4Q2TBC4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AC023794.5-201ENST00000564380 2157 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 BX284668.4-201ENST00000453917 508 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 MIR6799-201ENST00000620297 69 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AC100757.4-201ENST00000626934 759 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 NAP1L6-202ENST00000641404 1222 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AC138028.6-201ENST00000616106 1482 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AL157791.1-201ENST00000553667 1699 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AC111170.3-201ENST00000624282 2464 ntBASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.33□□□□□ -0.28
PRICKLE4Q2TBC4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 BRD7P5-201ENST00000299197 1822 ntBASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 AL928654.5-201ENST00000624831 2501 ntBASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 RNA5SP359-201ENST00000364838 113 ntBASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 AL008707.1-201ENST00000422498 534 ntBASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 AKR7A2P1-201ENST00000460134 915 ntBASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SCARNA20.5-201ENST00000516991 142 ntBASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms