Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.2□□□□□ -0.78
CKS1BP61024 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.2□□□□□ -0.78
CKS1BP61024 RBPMS2P1-201ENST00000437762 623 ntBASIC10.2□□□□□ -0.78
CKS1BP61024 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.2□□□□□ -0.78
CKS1BP61024 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.2□□□□□ -0.78
CKS1BP61024 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
CKS1BP61024 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC10.2□□□□□ -0.78
CKS1BP61024 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.2□□□□□ -0.78
CKS1BP61024 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
CKS1BP61024 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.2□□□□□ -0.78
CKS1BP61024 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.2□□□□□ -0.78
CKS1BP61024 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 AL589739.1-201ENST00000607720 493 ntBASIC10.2□□□□□ -0.78
CKS1BP61024 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.2□□□□□ -0.78
CKS1BP61024 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 AC073548.1-201ENST00000624088 1882 ntBASIC10.2□□□□□ -0.78
CKS1BP61024 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 CETN4P-206ENST00000642099 2168 ntBASIC10.2□□□□□ -0.78
CKS1BP61024 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CKS1BP61024 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CKS1BP61024 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CKS1BP61024 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.2□□□□□ -0.78
CKS1BP61024 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.2□□□□□ -0.78
CKS1BP61024 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.19□□□□□ -0.78
CKS1BP61024 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 SPDYE7P-202ENST00000420373 878 ntBASIC10.19□□□□□ -0.78
CKS1BP61024 AC015922.1-201ENST00000421102 1152 ntBASIC10.19□□□□□ -0.78
CKS1BP61024 HIST3H2BA-201ENST00000436555 524 ntBASIC10.19□□□□□ -0.78
CKS1BP61024 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 SLC25A1P1-201ENST00000528351 927 ntBASIC10.19□□□□□ -0.78
CKS1BP61024 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.19□□□□□ -0.78
CKS1BP61024 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
CKS1BP61024 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.19□□□□□ -0.78
CKS1BP61024 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.19□□□□□ -0.78
CKS1BP61024 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 MIR6080-201ENST00000617359 66 ntBASIC10.19□□□□□ -0.78
CKS1BP61024 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CKS1BP61024 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.19□□□□□ -0.78
CKS1BP61024 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CKS1BP61024 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms