Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CLK1P49759 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 AC105233.6-201ENST00000642093 218 ntBASIC13.65□□□□□ -0.22
CLK1P49759 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
CLK1P49759 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CLK1P49759 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.65□□□□□ -0.22
CLK1P49759 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.65□□□□□ -0.22
CLK1P49759 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 AL805961.2-201ENST00000642139 4817 ntBASIC13.65□□□□□ -0.22
CLK1P49759 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLK1P49759 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLK1P49759 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLK1P49759 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.64□□□□□ -0.23
CLK1P49759 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CLK1P49759 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CLK1P49759 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLK1P49759 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.64□□□□□ -0.23
CLK1P49759 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CLK1P49759 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CLK1P49759 AL035633.1-201ENST00000406139 838 ntBASIC13.64□□□□□ -0.23
CLK1P49759 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.64□□□□□ -0.23
CLK1P49759 AL355864.2-201ENST00000447420 863 ntBASIC13.64□□□□□ -0.23
CLK1P49759 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.64□□□□□ -0.23
CLK1P49759 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CLK1P49759 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.64□□□□□ -0.23
CLK1P49759 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 AC132938.4-201ENST00000623835 848 ntBASIC13.64□□□□□ -0.23
CLK1P49759 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.64□□□□□ -0.23
CLK1P49759 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLK1P49759 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLK1P49759 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.64□□□□□ -0.23
CLK1P49759 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CLK1P49759 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLK1P49759 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.64□□□□□ -0.23
CLK1P49759 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 PTPRVP-205ENST00000641549 5067 ntBASIC13.63□□□□□ -0.23
CLK1P49759 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 AC020658.7-201ENST00000624274 2442 ntBASIC13.63□□□□□ -0.23
CLK1P49759 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms