Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.86□□□□□ -0.35
SRP9P49458 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.86□□□□□ -0.35
SRP9P49458 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SRP9P49458 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.86□□□□□ -0.35
SRP9P49458 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 DUX4L47-201ENST00000566374 394 ntBASIC12.86□□□□□ -0.35
SRP9P49458 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.86□□□□□ -0.35
SRP9P49458 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.86□□□□□ -0.35
SRP9P49458 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.86□□□□□ -0.35
SRP9P49458 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.86□□□□□ -0.35
SRP9P49458 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.86□□□□□ -0.35
SRP9P49458 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SRP9P49458 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.86□□□□□ -0.35
SRP9P49458 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.85□□□□□ -0.35
SRP9P49458 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.85□□□□□ -0.35
SRP9P49458 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
SRP9P49458 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 AC106760.1-201ENST00000508690 800 ntBASIC12.85□□□□□ -0.35
SRP9P49458 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.85□□□□□ -0.35
SRP9P49458 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.85□□□□□ -0.35
SRP9P49458 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.85□□□□□ -0.35
SRP9P49458 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.85□□□□□ -0.35
SRP9P49458 RN7SL48P-201ENST00000579283 293 ntBASIC12.85□□□□□ -0.35
SRP9P49458 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 AC239800.4-201ENST00000603712 296 ntBASIC12.85□□□□□ -0.35
SRP9P49458 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 AL162274.1-201ENST00000617191 1098 ntBASIC12.85□□□□□ -0.35
SRP9P49458 AC132938.4-201ENST00000623835 848 ntBASIC12.85□□□□□ -0.35
SRP9P49458 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SRP9P49458 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRP9P49458 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.85□□□□□ -0.35
SRP9P49458 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 AC090643.2-201ENST00000623442 2029 ntBASIC12.84□□□□□ -0.35
SRP9P49458 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms