Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GRIA1P42261 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.57□□□□□ -0.08
GRIA1P42261 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.57□□□□□ -0.08
GRIA1P42261 AL354877.1-201ENST00000424412 413 ntBASIC14.57□□□□□ -0.08
GRIA1P42261 HILS1-202ENST00000545329 423 ntBASIC14.57□□□□□ -0.08
GRIA1P42261 AC003686.1-201ENST00000550956 1034 ntBASIC14.57□□□□□ -0.08
GRIA1P42261 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.57□□□□□ -0.08
GRIA1P42261 AC124068.2-201ENST00000569473 1109 ntBASIC14.57□□□□□ -0.08
GRIA1P42261 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.57□□□□□ -0.08
GRIA1P42261 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.57□□□□□ -0.08
GRIA1P42261 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.57□□□□□ -0.08
GRIA1P42261 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.57□□□□□ -0.08
GRIA1P42261 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
GRIA1P42261 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GRIA1P42261 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GRIA1P42261 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.57□□□□□ -0.08
GRIA1P42261 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
GRIA1P42261 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 CICP8-201ENST00000455800 2813 ntBASIC14.56□□□□□ -0.08
GRIA1P42261 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 CCT8L1P-201ENST00000465400 1674 ntBASIC14.56□□□□□ -0.08
GRIA1P42261 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.56□□□□□ -0.08
GRIA1P42261 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 AC079178.1-201ENST00000420915 656 ntBASIC14.56□□□□□ -0.08
GRIA1P42261 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.56□□□□□ -0.08
GRIA1P42261 AC006122.1-201ENST00000493323 440 ntBASIC14.56□□□□□ -0.08
GRIA1P42261 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.56□□□□□ -0.08
GRIA1P42261 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 AC005730.2-201ENST00000564549 1184 ntBASIC14.56□□□□□ -0.08
GRIA1P42261 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 AC021016.3-201ENST00000608367 477 ntBASIC14.56□□□□□ -0.08
GRIA1P42261 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.56□□□□□ -0.08
GRIA1P42261 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GRIA1P42261 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.56□□□□□ -0.08
GRIA1P42261 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GRIA1P42261 AC005252.3-201ENST00000623855 2258 ntBASIC14.55□□□□□ -0.08
GRIA1P42261 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GRIA1P42261 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.55□□□□□ -0.08
GRIA1P42261 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GRIA1P42261 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.55□□□□□ -0.08
GRIA1P42261 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.55□□□□□ -0.08
GRIA1P42261 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GRIA1P42261 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GRIA1P42261 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.55□□□□□ -0.08
GRIA1P42261 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.55□□□□□ -0.08
GRIA1P42261 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GRIA1P42261 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms