Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH3P22223 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH3P22223 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH3P22223 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH3P22223 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH3P22223 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH3P22223 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH3P22223 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH3P22223 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH3P22223 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDH3P22223 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH3P22223 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CDH3P22223 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH3P22223 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDH3P22223 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH3P22223 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH3P22223 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CDH3P22223 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH3P22223 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 AL035414.1-201ENST00000451327 857 ntBASIC14.21□□□□□ -0.13
CDH3P22223 CICP12-201ENST00000455801 843 ntBASIC14.21□□□□□ -0.13
CDH3P22223 AC044849.1-201ENST00000519737 1188 ntBASIC14.21□□□□□ -0.13
CDH3P22223 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH3P22223 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH3P22223 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH3P22223 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDH3P22223 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH3P22223 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH3P22223 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
CDH3P22223 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH3P22223 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH3P22223 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CDH3P22223 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDH3P22223 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 AC138028.6-201ENST00000616106 1482 ntBASIC14.2□□□□□ -0.14
CDH3P22223 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CDH3P22223 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH3P22223 NKAIN1P1-201ENST00000435754 582 ntBASIC14.2□□□□□ -0.14
CDH3P22223 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 AKR7A2P1-201ENST00000460134 915 ntBASIC14.2□□□□□ -0.14
CDH3P22223 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH3P22223 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH3P22223 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CDH3P22223 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH3P22223 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms