Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.69■□□□□ 0.26
ERCC3P19447 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.69■□□□□ 0.26
ERCC3P19447 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 AC006504.5-208ENST00000588784 2401 ntBASIC16.69■□□□□ 0.26
ERCC3P19447 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.69■□□□□ 0.26
ERCC3P19447 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC3P19447 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC3P19447 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
ERCC3P19447 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC3P19447 CHCHD2P9-201ENST00000461726 456 ntBASIC16.68■□□□□ 0.26
ERCC3P19447 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC3P19447 AC114947.1-202ENST00000514136 344 ntBASIC16.68■□□□□ 0.26
ERCC3P19447 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
ERCC3P19447 MIR4649-201ENST00000582839 64 ntBASIC16.68■□□□□ 0.26
ERCC3P19447 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC3P19447 AL022334.2-201ENST00000610000 484 ntBASIC16.68■□□□□ 0.26
ERCC3P19447 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 AC009560.1-201ENST00000620208 434 ntBASIC16.68■□□□□ 0.26
ERCC3P19447 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ERCC3P19447 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC3P19447 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC3P19447 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.67■□□□□ 0.26
ERCC3P19447 RN7SL530P-201ENST00000485097 298 ntBASIC16.67■□□□□ 0.26
ERCC3P19447 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.67■□□□□ 0.26
ERCC3P19447 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC3P19447 HLA-C-210ENST00000640219 976 ntBASIC16.67■□□□□ 0.26
ERCC3P19447 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC3P19447 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms