Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 AL512384.1-201ENST00000406683 331 ntBASIC15.65■□□□□ 0.1
CCDC172P0C7W6 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.65■□□□□ 0.1
CCDC172P0C7W6 AC112492.5-201ENST00000421897 457 ntBASIC15.65■□□□□ 0.1
CCDC172P0C7W6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 KRT43P-201ENST00000434019 910 ntBASIC15.65■□□□□ 0.1
CCDC172P0C7W6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 AL355994.2-201ENST00000447882 704 ntBASIC15.65■□□□□ 0.1
CCDC172P0C7W6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 AL590640.2-201ENST00000457038 527 ntBASIC15.65■□□□□ 0.1
CCDC172P0C7W6 FTH1P14-201ENST00000482930 551 ntBASIC15.65■□□□□ 0.1
CCDC172P0C7W6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 AP001972.5-201ENST00000624624 2338 ntBASIC15.65■□□□□ 0.1
CCDC172P0C7W6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC172P0C7W6 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 AC007551.1-201ENST00000457394 519 ntBASIC15.64■□□□□ 0.09
CCDC172P0C7W6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.64■□□□□ 0.09
CCDC172P0C7W6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 AC008735.3-201ENST00000596646 500 ntBASIC15.64■□□□□ 0.09
CCDC172P0C7W6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC172P0C7W6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms