Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 AP000356.3-201ENST00000382243 753 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 RPL17P11-201ENST00000417593 544 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 RPS9P1-201ENST00000419943 583 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 AL807761.2-201ENST00000422849 729 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 RPL7P35-201ENST00000446943 740 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 LDHBP1-201ENST00000455730 1119 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 AC104784.1-201ENST00000473096 294 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 AC138894.2-201ENST00000602838 371 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 AC090386.2-201ENST00000623010 1039 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 ST20-AS1-201ENST00000560255 4223 ntBASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB40ALP0C0E4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AC005840.4-201ENST00000541242 2494 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AP002803.1-201ENST00000528836 498 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 KRT8P1-201ENST00000557533 1207 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 NPM1P43-201ENST00000558669 786 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 DNM1P30-201ENST00000563586 452 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AC005586.2-201ENST00000563946 837 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 RN7SL555P-201ENST00000584742 339 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AC007326.1-201ENST00000604539 458 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AC087045.2-201ENST00000606279 1003 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 U62317.3-201ENST00000608319 855 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AC242376.2-201ENST00000619355 883 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms