Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 AL021578.1-201ENST00000613646 709 ntBASIC12.06□□□□□ -0.48
SRRM5B3KS81 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRRM5B3KS81 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.06□□□□□ -0.48
SRRM5B3KS81 AL157996.1-201ENST00000624684 2299 ntBASIC12.06□□□□□ -0.48
SRRM5B3KS81 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 AL365209.1-201ENST00000624418 6473 ntBASIC12.05□□□□□ -0.48
SRRM5B3KS81 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 RN7SKP214-201ENST00000364208 315 ntBASIC12.05□□□□□ -0.48
SRRM5B3KS81 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 AC103592.1-201ENST00000394513 664 ntBASIC12.05□□□□□ -0.48
SRRM5B3KS81 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 HIST2H2BC-201ENST00000498492 580 ntBASIC12.05□□□□□ -0.48
SRRM5B3KS81 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 AC026740.1-201ENST00000607068 791 ntBASIC12.05□□□□□ -0.48
SRRM5B3KS81 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 KRT8P21-201ENST00000430398 1491 ntBASIC12.05□□□□□ -0.48
SRRM5B3KS81 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 BEND3P1-201ENST00000421591 1944 ntBASIC12.05□□□□□ -0.48
SRRM5B3KS81 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 SHMT1P1-201ENST00000419974 1312 ntBASIC12.05□□□□□ -0.48
SRRM5B3KS81 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM5B3KS81 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM5B3KS81 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM5B3KS81 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SRRM5B3KS81 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM5B3KS81 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM5B3KS81 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SRRM5B3KS81 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM5B3KS81 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.04□□□□□ -0.48
SRRM5B3KS81 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM5B3KS81 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM5B3KS81 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms