Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 RN7SL832P-201ENST00000607781 1756 ntBASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 Z98885.3-201ENST00000624882 1757 ntBASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 AC084018.2-201ENST00000613093 2607 ntBASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 AL031590.1-202ENST00000641466 1737 ntBASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AC020658.6-201ENST00000623564 1870 ntBASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AC104117.4-201ENST00000521486 847 ntBASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AL139317.2-201ENST00000556998 158 ntBASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AC136475.7-201ENST00000602949 592 ntBASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AL031768.1-201ENST00000606542 701 ntBASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 AC104506.1-201ENST00000609247 429 ntBASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 C18orf15-201ENST00000623680 2534 ntBASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM88BA6NKF7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.27■□□□□ 0.19
TMEM88BA6NKF7 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM88BA6NKF7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM88BA6NKF7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM88BA6NKF7 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TMEM88BA6NKF7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TMEM88BA6NKF7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TMEM88BA6NKF7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEM88BA6NKF7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 OR7E12P-201ENST00000344740 973 ntBASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 MKL1-204ENST00000402630 747 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 HLA-DQB3-203ENST00000425319 356 ntBASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 TPT1P11-201ENST00000458482 498 ntBASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 OR2A1-AS1-203ENST00000468575 568 ntBASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms