Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 POM121L8P-201ENST00000417732 1281 ntBASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 POM121L9P-203ENST00000441984 1285 ntBASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 AC004899.2-201ENST00000622993 3860 ntBASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 MKRN5P-201ENST00000445263 1467 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms