Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 AC018445.4-201ENST00000624066 2291 ntBASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB3IPQ96QF0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 YBX2P1-201ENST00000394192 760 ntBASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AC000095.1-201ENST00000603208 874 ntBASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AC093525.8-201ENST00000624099 1342 ntBASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AC102953.2-201ENST00000609755 3026 ntBASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RAB3IPQ96QF0 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC14.08□□□□□ -0.15
RAB3IPQ96QF0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB3IPQ96QF0 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.08□□□□□ -0.15
RAB3IPQ96QF0 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RAB3IPQ96QF0 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB3IPQ96QF0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB3IPQ96QF0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 AC007967.2-201ENST00000432613 625 ntBASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 AL591424.1-201ENST00000442569 1213 ntBASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 BANF1P1-201ENST00000553684 263 ntBASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 AC027601.4-201ENST00000611259 610 ntBASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB3IPQ96QF0 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms