Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AL354877.1-201ENST00000424412 413 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 FAM21FP-201ENST00000426241 1131 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 KRT223P-202ENST00000449164 1292 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 HILS1-202ENST00000545329 423 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AL162426.1-201ENST00000624141 743 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AC015818.8-201ENST00000587907 1519 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 REXO1L6P-201ENST00000603433 1515 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 AC011474.4-201ENST00000623523 2076 ntBASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.43□□□□□ -0.58
TTC9CQ8N5M4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AL008718.2-201ENST00000609206 1313 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 AC090643.2-201ENST00000623442 2029 ntBASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TTC9CQ8N5M4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms