Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 AL365203.3-201ENST00000609742 2057 ntBASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 MIR6746-201ENST00000620971 63 ntBASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RP1L1Q8IWN7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 AC018529.2-202ENST00000611482 3087 ntBASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 GCOM2-201ENST00000509133 1104 ntBASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 AC005041.3-201ENST00000606287 649 ntBASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
RP1L1Q8IWN7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 AC010234.1-201ENST00000494599 870 ntBASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 AC073592.2-201ENST00000623062 780 ntBASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.08□□□□□ -0.31
RP1L1Q8IWN7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 AC144831.1-201ENST00000573312 2656 ntBASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 AC087481.3-201ENST00000602886 1894 ntBASIC13.08□□□□□ -0.32
RP1L1Q8IWN7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms