Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 RN7SL470P-201ENST00000583069 259 ntBASIC15.32■□□□□ 0.04
RNF135Q8IUD6 MIR4472-1-201ENST00000584349 80 ntBASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AC007326.1-201ENST00000604539 458 ntBASIC15.32■□□□□ 0.04
RNF135Q8IUD6 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AP001184.1-201ENST00000637936 376 ntBASIC15.32■□□□□ 0.04
RNF135Q8IUD6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF135Q8IUD6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 BANF1P3-201ENST00000412556 261 ntBASIC15.31■□□□□ 0.04
RNF135Q8IUD6 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 AL354861.1-201ENST00000445213 355 ntBASIC15.31■□□□□ 0.04
RNF135Q8IUD6 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 RN7SL396P-201ENST00000471086 295 ntBASIC15.31■□□□□ 0.04
RNF135Q8IUD6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF135Q8IUD6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms