Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM5Q71RC9 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 WASH7P-201ENST00000488147 1351 ntBASIC17.8■□□□□ 0.44
SMIM5Q71RC9 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 SNORA57-201ENST00000383870 149 ntBASIC17.8■□□□□ 0.44
SMIM5Q71RC9 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 MIR2278-201ENST00000516344 96 ntBASIC17.8■□□□□ 0.44
SMIM5Q71RC9 KF455155.1-201ENST00000604493 303 ntBASIC17.8■□□□□ 0.44
SMIM5Q71RC9 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.8■□□□□ 0.44
SMIM5Q71RC9 BX322534.1-201ENST00000635574 241 ntBASIC17.8■□□□□ 0.44
SMIM5Q71RC9 AC215524.1-201ENST00000635696 241 ntBASIC17.8■□□□□ 0.44
SMIM5Q71RC9 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM5Q71RC9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 AC006486.2-201ENST00000624246 2199 ntBASIC17.79■□□□□ 0.44
SMIM5Q71RC9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 ZNF877P-201ENST00000437614 612 ntBASIC17.79■□□□□ 0.44
SMIM5Q71RC9 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 AC079414.2-201ENST00000567157 1104 ntBASIC17.79■□□□□ 0.44
SMIM5Q71RC9 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 RN7SL602P-201ENST00000578326 324 ntBASIC17.79■□□□□ 0.44
SMIM5Q71RC9 RN7SL718P-201ENST00000581254 303 ntBASIC17.79■□□□□ 0.44
SMIM5Q71RC9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM5Q71RC9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.78■□□□□ 0.44
SMIM5Q71RC9 ALG1L7P-201ENST00000502317 768 ntBASIC17.78■□□□□ 0.44
SMIM5Q71RC9 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 AL049840.2-201ENST00000602722 535 ntBASIC17.78■□□□□ 0.44
SMIM5Q71RC9 AC005746.3-201ENST00000614751 393 ntBASIC17.78■□□□□ 0.44
SMIM5Q71RC9 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM5Q71RC9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms