Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.58□□□□□ -0.39
HIST1H3AP68431 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
HIST1H3AP68431 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
HIST1H3AP68431 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
HIST1H3AP68431 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
HIST1H3AP68431 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HIST1H3AP68431 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HIST1H3AP68431 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
HIST1H3AP68431 FAM90A7P-201ENST00000382628 1395 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 FAM90A23P-201ENST00000400136 1395 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 KRT8P29-201ENST00000420409 1371 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 MIR663B-201ENST00000408361 115 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 OR2R1P-201ENST00000441404 914 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 HLA-J-204ENST00000495278 958 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 AL512310.5-201ENST00000551999 515 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 AC005730.2-201ENST00000564549 1184 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 AC009542.2-202ENST00000619004 1067 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 AGAP10P-201ENST00000454844 2418 ntBASIC12.58□□□□□ -0.4
HIST1H3AP68431 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H3AP68431 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H3AP68431 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms