Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CMC4P56277 AC103592.1-201ENST00000394513 664 ntBASIC10.73□□□□□ -0.69
CMC4P56277 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 KRT18P36-201ENST00000411618 1276 ntBASIC10.73□□□□□ -0.69
CMC4P56277 FNTAP2-201ENST00000430308 634 ntBASIC10.73□□□□□ -0.69
CMC4P56277 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC10.73□□□□□ -0.69
CMC4P56277 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC10.73□□□□□ -0.69
CMC4P56277 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 AC092299.1-201ENST00000632679 757 ntBASIC10.73□□□□□ -0.69
CMC4P56277 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CMC4P56277 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CMC4P56277 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 AC136759.1-202ENST00000530858 2194 ntBASIC10.73□□□□□ -0.69
CMC4P56277 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 RPL13AP3-202ENST00000494676 1473 ntBASIC10.73□□□□□ -0.69
CMC4P56277 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.72□□□□□ -0.69
CMC4P56277 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CMC4P56277 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 SLC16A6P1-201ENST00000413214 1059 ntBASIC10.72□□□□□ -0.69
CMC4P56277 AC016700.1-201ENST00000429424 312 ntBASIC10.72□□□□□ -0.69
CMC4P56277 AL133466.1-201ENST00000447582 150 ntBASIC10.72□□□□□ -0.69
CMC4P56277 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.72□□□□□ -0.69
CMC4P56277 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC10.72□□□□□ -0.69
CMC4P56277 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.72□□□□□ -0.69
CMC4P56277 AC244093.1-201ENST00000610837 814 ntBASIC10.72□□□□□ -0.69
CMC4P56277 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.72□□□□□ -0.69
CMC4P56277 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 AC007952.5-201ENST00000572818 1486 ntBASIC10.72□□□□□ -0.69
CMC4P56277 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 AC018735.1-201ENST00000437208 1502 ntBASIC10.72□□□□□ -0.69
CMC4P56277 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms