Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
APOC4P55056 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
APOC4P55056 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
APOC4P55056 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC10.56□□□□□ -0.72
APOC4P55056 FTLP1-201ENST00000449155 526 ntBASIC10.56□□□□□ -0.72
APOC4P55056 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC10.56□□□□□ -0.72
APOC4P55056 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC10.56□□□□□ -0.72
APOC4P55056 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 FOS-206ENST00000555347 1280 ntTSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 AC079328.1-201ENST00000560358 952 ntBASIC10.56□□□□□ -0.72
APOC4P55056 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC10.56□□□□□ -0.72
APOC4P55056 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC10.56□□□□□ -0.72
APOC4P55056 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
APOC4P55056 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 AC079336.7-201ENST00000623428 1078 ntBASIC10.56□□□□□ -0.72
APOC4P55056 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.56□□□□□ -0.72
APOC4P55056 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC10.56□□□□□ -0.72
APOC4P55056 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
APOC4P55056 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 AC215219.1-201ENST00000400706 1817 ntBASIC10.56□□□□□ -0.72
APOC4P55056 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
APOC4P55056 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 MTHFR-210ENST00000641407 2387 ntBASIC10.55□□□□□ -0.72
APOC4P55056 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 LINC01165-201ENST00000445190 1623 ntBASIC10.55□□□□□ -0.72
APOC4P55056 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms