Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3AP50213 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3AP50213 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3AP50213 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3AP50213 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3AP50213 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
IDH3AP50213 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3AP50213 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IDH3AP50213 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3AP50213 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3AP50213 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3AP50213 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IDH3AP50213 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
IDH3AP50213 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.02□□□□□ -0.16
IDH3AP50213 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.02□□□□□ -0.16
IDH3AP50213 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
IDH3AP50213 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.02□□□□□ -0.16
IDH3AP50213 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IDH3AP50213 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3AP50213 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
IDH3AP50213 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.02□□□□□ -0.16
IDH3AP50213 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
IDH3AP50213 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.02□□□□□ -0.16
IDH3AP50213 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IDH3AP50213 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
IDH3AP50213 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
IDH3AP50213 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 INE1-201ENST00000456273 945 ntBASIC14.02□□□□□ -0.17
IDH3AP50213 AL512638.1-201ENST00000457493 794 ntBASIC14.02□□□□□ -0.17
IDH3AP50213 AC011495.1-201ENST00000498085 584 ntBASIC14.02□□□□□ -0.17
IDH3AP50213 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.02□□□□□ -0.17
IDH3AP50213 AC123567.1-201ENST00000548294 1261 ntBASIC14.02□□□□□ -0.17
IDH3AP50213 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
IDH3AP50213 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.02□□□□□ -0.17
IDH3AP50213 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.02□□□□□ -0.17
IDH3AP50213 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.02□□□□□ -0.17
IDH3AP50213 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.02□□□□□ -0.17
IDH3AP50213 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.02□□□□□ -0.17
IDH3AP50213 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.02□□□□□ -0.17
IDH3AP50213 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IDH3AP50213 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IDH3AP50213 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.02□□□□□ -0.17
IDH3AP50213 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IDH3AP50213 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.01□□□□□ -0.17
IDH3AP50213 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
IDH3AP50213 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
IDH3AP50213 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
IDH3AP50213 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.01□□□□□ -0.17
IDH3AP50213 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IDH3AP50213 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
IDH3AP50213 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IDH3AP50213 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms