Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1DP48730 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1DP48730 AC067931.2-201ENST00000623655 2003 ntBASIC14.33□□□□□ -0.12
CSNK1DP48730 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1DP48730 PPP1R2P4-201ENST00000424051 595 ntBASIC14.33□□□□□ -0.12
CSNK1DP48730 CEP164P1-201ENST00000455142 418 ntBASIC14.33□□□□□ -0.12
CSNK1DP48730 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1DP48730 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1DP48730 AC134698.3-201ENST00000523880 214 ntBASIC14.33□□□□□ -0.12
CSNK1DP48730 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1DP48730 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1DP48730 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1DP48730 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1DP48730 AL133467.4-201ENST00000602953 725 ntBASIC14.33□□□□□ -0.12
CSNK1DP48730 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1DP48730 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1DP48730 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1DP48730 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1DP48730 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1DP48730 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1DP48730 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1DP48730 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1DP48730 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1DP48730 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1DP48730 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 MIR645-201ENST00000385283 94 ntBASIC14.32□□□□□ -0.12
CSNK1DP48730 LINC00265-2P-201ENST00000413372 782 ntBASIC14.32□□□□□ -0.12
CSNK1DP48730 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CSNK1DP48730 AC105129.2-201ENST00000559536 390 ntBASIC14.32□□□□□ -0.12
CSNK1DP48730 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1DP48730 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1DP48730 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1DP48730 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1DP48730 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1DP48730 RCC2P1-201ENST00000452257 1476 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.31□□□□□ -0.12
CSNK1DP48730 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSNK1DP48730 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CSNK1DP48730 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.31□□□□□ -0.12
CSNK1DP48730 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1DP48730 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 AL583805.1-201ENST00000391389 531 ntBASIC14.31□□□□□ -0.12
CSNK1DP48730 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1DP48730 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms