Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
MMP13P45452 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
MMP13P45452 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.02■□□□□ -0
MMP13P45452 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.02■□□□□ -0
MMP13P45452 AC010328.2-201ENST00000597698 1111 ntBASIC15.02■□□□□ -0
MMP13P45452 BNIP3P29-201ENST00000598302 571 ntBASIC15.02■□□□□ -0
MMP13P45452 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.02■□□□□ -0
MMP13P45452 AC011447.5-201ENST00000616168 564 ntBASIC15.02■□□□□ -0
MMP13P45452 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
MMP13P45452 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.02□□□□□ -0.01
MMP13P45452 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MMP13P45452 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP13P45452 SHC1P1-201ENST00000425230 1745 ntBASIC15.02□□□□□ -0.01
MMP13P45452 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP13P45452 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP13P45452 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP13P45452 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.02□□□□□ -0.01
MMP13P45452 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP13P45452 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MMP13P45452 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
MMP13P45452 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MMP13P45452 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.02□□□□□ -0.01
MMP13P45452 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 AC079178.1-201ENST00000420915 656 ntBASIC15.01□□□□□ -0.01
MMP13P45452 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 CICP12-201ENST00000455801 843 ntBASIC15.01□□□□□ -0.01
MMP13P45452 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.01□□□□□ -0.01
MMP13P45452 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.01□□□□□ -0.01
MMP13P45452 RNA5SP412-201ENST00000516234 123 ntBASIC15.01□□□□□ -0.01
MMP13P45452 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 EEF1DP1-201ENST00000585891 896 ntBASIC15.01□□□□□ -0.01
MMP13P45452 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.01□□□□□ -0.01
MMP13P45452 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
MMP13P45452 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 KHSRPP1-201ENST00000427983 1768 ntBASIC15.01□□□□□ -0.01
MMP13P45452 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP13P45452 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP13P45452 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15□□□□□ -0.01
MMP13P45452 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15□□□□□ -0.01
MMP13P45452 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15□□□□□ -0.01
MMP13P45452 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
MMP13P45452 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
MMP13P45452 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
MMP13P45452 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15□□□□□ -0.01
MMP13P45452 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MMP13P45452 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
MMP13P45452 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 MIR326-201ENST00000362220 95 ntBASIC15□□□□□ -0.01
MMP13P45452 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15□□□□□ -0.01
MMP13P45452 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms