Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.47□□□□□ -0.09
MDH1P40925 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.47□□□□□ -0.09
MDH1P40925 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 AC027237.1-201ENST00000560942 655 ntBASIC14.47□□□□□ -0.09
MDH1P40925 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 AC022145.2-201ENST00000598203 171 ntBASIC14.47□□□□□ -0.09
MDH1P40925 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.47□□□□□ -0.09
MDH1P40925 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MDH1P40925 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 AC134407.3-201ENST00000624035 2139 ntBASIC14.47□□□□□ -0.09
MDH1P40925 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MDH1P40925 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MDH1P40925 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.46□□□□□ -0.09
MDH1P40925 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
MDH1P40925 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MDH1P40925 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.46□□□□□ -0.09
MDH1P40925 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MDH1P40925 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 EIF3FP3-201ENST00000434851 1086 ntBASIC14.46□□□□□ -0.09
MDH1P40925 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.46□□□□□ -0.09
MDH1P40925 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.46□□□□□ -0.09
MDH1P40925 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MDH1P40925 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
MDH1P40925 TIMM17BP1-201ENST00000545713 516 ntBASIC14.46□□□□□ -0.09
MDH1P40925 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MDH1P40925 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.46□□□□□ -0.09
MDH1P40925 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.46□□□□□ -0.09
MDH1P40925 AC018445.4-201ENST00000624066 2291 ntBASIC14.46□□□□□ -0.09
MDH1P40925 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.46□□□□□ -0.09
MDH1P40925 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MDH1P40925 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MDH1P40925 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MDH1P40925 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
MDH1P40925 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
MDH1P40925 PAM-203ENST00000346918 3302 ntTSL 5 BASIC14.46□□□□□ -0.1
MDH1P40925 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MDH1P40925 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC14.46□□□□□ -0.1
MDH1P40925 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MDH1P40925 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MDH1P40925 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MDH1P40925 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
MDH1P40925 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14.45□□□□□ -0.1
MDH1P40925 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
MDH1P40925 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MDH1P40925 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.45□□□□□ -0.1
MDH1P40925 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MDH1P40925 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms