Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC239868.1-201ENST00000369385 493 ntBASIC14.29□□□□□ -0.12
HMGCLP35914 HMGA1P1-201ENST00000415560 1062 ntBASIC14.29□□□□□ -0.12
HMGCLP35914 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGCLP35914 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.29□□□□□ -0.12
HMGCLP35914 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.29□□□□□ -0.12
HMGCLP35914 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HMGCLP35914 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCLP35914 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HMGCLP35914 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HMGCLP35914 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HMGCLP35914 RNA5SP359-201ENST00000364838 113 ntBASIC14.28□□□□□ -0.12
HMGCLP35914 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.28□□□□□ -0.12
HMGCLP35914 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
HMGCLP35914 AL596276.2-201ENST00000447525 331 ntBASIC14.28□□□□□ -0.12
HMGCLP35914 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.28□□□□□ -0.12
HMGCLP35914 RN7SL530P-201ENST00000485097 298 ntBASIC14.28□□□□□ -0.12
HMGCLP35914 RPL13AP3-202ENST00000494676 1473 ntBASIC14.28□□□□□ -0.12
HMGCLP35914 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCLP35914 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HMGCLP35914 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCLP35914 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.28□□□□□ -0.12
HMGCLP35914 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCLP35914 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCLP35914 RN7SL774P-201ENST00000577467 290 ntBASIC14.28□□□□□ -0.12
HMGCLP35914 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
HMGCLP35914 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCLP35914 MIR6787-201ENST00000616675 61 ntBASIC14.28□□□□□ -0.12
HMGCLP35914 GPR182-203ENST00000622922 591 ntBASIC14.28□□□□□ -0.12
HMGCLP35914 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCLP35914 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HMGCLP35914 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HMGCLP35914 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCLP35914 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCLP35914 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCLP35914 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGCLP35914 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms