Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
COPB2P35606 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
COPB2P35606 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
COPB2P35606 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 AL354702.1-201ENST00000442006 1960 ntBASIC16.39■□□□□ 0.21
COPB2P35606 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.39■□□□□ 0.21
COPB2P35606 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
COPB2P35606 LINC00265-2P-201ENST00000413372 782 ntBASIC16.39■□□□□ 0.21
COPB2P35606 PPP1R2P4-201ENST00000424051 595 ntBASIC16.39■□□□□ 0.21
COPB2P35606 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 RN7SL767P-201ENST00000493013 295 ntBASIC16.39■□□□□ 0.21
COPB2P35606 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.39■□□□□ 0.21
COPB2P35606 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.39■□□□□ 0.21
COPB2P35606 AC007250.1-201ENST00000608934 338 ntBASIC16.39■□□□□ 0.21
COPB2P35606 AC138466.5-201ENST00000624002 808 ntBASIC16.39■□□□□ 0.21
COPB2P35606 AC009145.4-201ENST00000625119 1294 ntBASIC16.39■□□□□ 0.21
COPB2P35606 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.39■□□□□ 0.21
COPB2P35606 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.39■□□□□ 0.21
COPB2P35606 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
COPB2P35606 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.39■□□□□ 0.21
COPB2P35606 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPB2P35606 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COPB2P35606 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.38■□□□□ 0.21
COPB2P35606 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.38■□□□□ 0.21
COPB2P35606 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.38■□□□□ 0.21
COPB2P35606 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
COPB2P35606 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COPB2P35606 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 AL627389.1-201ENST00000413508 1182 ntBASIC16.38■□□□□ 0.21
COPB2P35606 BX679664.3-201ENST00000414070 555 ntBASIC16.38■□□□□ 0.21
COPB2P35606 PIN4P1-201ENST00000451079 396 ntBASIC16.38■□□□□ 0.21
COPB2P35606 AC113935.1-201ENST00000471722 555 ntBASIC16.38■□□□□ 0.21
COPB2P35606 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COPB2P35606 CR383656.3-201ENST00000551315 183 ntBASIC16.38■□□□□ 0.21
COPB2P35606 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COPB2P35606 AC007191.1-201ENST00000623179 2995 ntBASIC16.38■□□□□ 0.21
COPB2P35606 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.38■□□□□ 0.21
COPB2P35606 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
COPB2P35606 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.38■□□□□ 0.21
COPB2P35606 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
COPB2P35606 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPB2P35606 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.38■□□□□ 0.21
COPB2P35606 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms