Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.28■□□□□ 0.04
CTNNA1P35221 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
CTNNA1P35221 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTNNA1P35221 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTNNA1P35221 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.27■□□□□ 0.04
CTNNA1P35221 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.27■□□□□ 0.04
CTNNA1P35221 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CTNNA1P35221 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.27■□□□□ 0.04
CTNNA1P35221 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.27■□□□□ 0.04
CTNNA1P35221 AL365181.3-201ENST00000605886 3222 ntBASIC15.27■□□□□ 0.04
CTNNA1P35221 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.27■□□□□ 0.04
CTNNA1P35221 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CTNNA1P35221 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.27■□□□□ 0.04
CTNNA1P35221 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 RNA5SP486-201ENST00000515961 83 ntBASIC15.27■□□□□ 0.04
CTNNA1P35221 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTNNA1P35221 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.27■□□□□ 0.04
CTNNA1P35221 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.27■□□□□ 0.04
CTNNA1P35221 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTNNA1P35221 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CTNNA1P35221 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.27■□□□□ 0.03
CTNNA1P35221 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CTNNA1P35221 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.27■□□□□ 0.03
CTNNA1P35221 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.27■□□□□ 0.03
CTNNA1P35221 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.27■□□□□ 0.03
CTNNA1P35221 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTNNA1P35221 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.27■□□□□ 0.03
CTNNA1P35221 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CTNNA1P35221 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 AC005229.1-201ENST00000392885 409 ntBASIC15.26■□□□□ 0.03
CTNNA1P35221 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 AL355864.2-201ENST00000447420 863 ntBASIC15.26■□□□□ 0.03
CTNNA1P35221 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 AL590640.2-201ENST00000457038 527 ntBASIC15.26■□□□□ 0.03
CTNNA1P35221 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.26■□□□□ 0.03
CTNNA1P35221 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.26■□□□□ 0.03
CTNNA1P35221 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 MIR4683-201ENST00000579659 81 ntBASIC15.26■□□□□ 0.03
CTNNA1P35221 AC072061.1-201ENST00000569710 2234 ntBASIC15.26■□□□□ 0.03
CTNNA1P35221 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms