Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.55□□□□□ -0.24
CHMP24386 AC015909.5-201ENST00000624336 2266 ntBASIC13.55□□□□□ -0.24
CHMP24386 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.54□□□□□ -0.24
CHMP24386 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.54□□□□□ -0.24
CHMP24386 RN7SL560P-201ENST00000577943 264 ntBASIC13.54□□□□□ -0.24
CHMP24386 RN7SL219P-201ENST00000582872 296 ntBASIC13.54□□□□□ -0.24
CHMP24386 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.54□□□□□ -0.24
CHMP24386 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.54□□□□□ -0.24
CHMP24386 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 AC073548.1-201ENST00000624088 1882 ntBASIC13.54□□□□□ -0.24
CHMP24386 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 AL136172.1-201ENST00000598590 1394 ntBASIC13.54□□□□□ -0.24
CHMP24386 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.54□□□□□ -0.24
CHMP24386 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHMP24386 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.54□□□□□ -0.24
CHMP24386 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CHMP24386 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.53□□□□□ -0.24
CHMP24386 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.53□□□□□ -0.24
CHMP24386 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CHMP24386 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 AL136309.1-201ENST00000403917 691 ntBASIC13.53□□□□□ -0.24
CHMP24386 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 AC007969.1-201ENST00000433675 447 ntBASIC13.53□□□□□ -0.24
CHMP24386 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.53□□□□□ -0.24
CHMP24386 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.53□□□□□ -0.24
CHMP24386 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.53□□□□□ -0.24
CHMP24386 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.53□□□□□ -0.24
CHMP24386 EEF1DP1-201ENST00000585891 896 ntBASIC13.53□□□□□ -0.24
CHMP24386 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms