Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
XPAP23025 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
XPAP23025 KRT18P36-201ENST00000411618 1276 ntBASIC14.56□□□□□ -0.08
XPAP23025 ACTG1P2-201ENST00000415776 1125 ntBASIC14.56□□□□□ -0.08
XPAP23025 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 ACTG1P11-201ENST00000425411 1125 ntBASIC14.56□□□□□ -0.08
XPAP23025 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 AC006335.1-201ENST00000445200 547 ntBASIC14.56□□□□□ -0.08
XPAP23025 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 AC245884.6-201ENST00000515672 1067 ntBASIC14.56□□□□□ -0.08
XPAP23025 POU5F1P2-201ENST00000521750 823 ntBASIC14.56□□□□□ -0.08
XPAP23025 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.56□□□□□ -0.08
XPAP23025 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.56□□□□□ -0.08
XPAP23025 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 AC140658.4-201ENST00000561990 352 ntBASIC14.56□□□□□ -0.08
XPAP23025 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.56□□□□□ -0.08
XPAP23025 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.56□□□□□ -0.08
XPAP23025 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.56□□□□□ -0.08
XPAP23025 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.56□□□□□ -0.08
XPAP23025 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.56□□□□□ -0.08
XPAP23025 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
XPAP23025 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.56□□□□□ -0.08
XPAP23025 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
XPAP23025 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
XPAP23025 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.55□□□□□ -0.08
XPAP23025 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms