Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC15.41■□□□□ 0.06
SYN1P17600 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SYN1P17600 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 AIG1-203ENST00000367596 559 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.41■□□□□ 0.06
SYN1P17600 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 ABCD1P4-201ENST00000399687 604 ntBASIC15.41■□□□□ 0.06
SYN1P17600 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.41■□□□□ 0.06
SYN1P17600 AC073210.1-201ENST00000414799 232 ntBASIC15.41■□□□□ 0.06
SYN1P17600 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.41■□□□□ 0.06
SYN1P17600 HMGA1P2-201ENST00000430198 324 ntBASIC15.41■□□□□ 0.06
SYN1P17600 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 AC007679.1-201ENST00000458609 502 ntBASIC15.41■□□□□ 0.06
SYN1P17600 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC15.41■□□□□ 0.06
SYN1P17600 RPSAP70-201ENST00000504462 864 ntBASIC15.41■□□□□ 0.06
SYN1P17600 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.41■□□□□ 0.06
SYN1P17600 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.41■□□□□ 0.06
SYN1P17600 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SYN1P17600 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 NFIC-211ENST00000641145 8399 ntBASIC15.41■□□□□ 0.06
SYN1P17600 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.41■□□□□ 0.06
SYN1P17600 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYN1P17600 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SYN1P17600 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SYN1P17600 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SYN1P17600 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.4■□□□□ 0.06
SYN1P17600 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SYN1P17600 AL596257.1-201ENST00000641463 2694 ntBASIC15.4■□□□□ 0.06
SYN1P17600 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 MIR339-201ENST00000362153 94 ntBASIC15.4■□□□□ 0.06
SYN1P17600 HNRNPA1P25-201ENST00000422644 937 ntBASIC15.4■□□□□ 0.06
SYN1P17600 AL954722.1-201ENST00000431238 259 ntBASIC15.4■□□□□ 0.06
SYN1P17600 AL136084.1-201ENST00000449172 318 ntBASIC15.4■□□□□ 0.06
SYN1P17600 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 TBC1D3P6-201ENST00000505954 962 ntBASIC15.4■□□□□ 0.06
SYN1P17600 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SYN1P17600 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC15.4■□□□□ 0.06
SYN1P17600 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 AC136621.1-201ENST00000624017 2304 ntBASIC15.4■□□□□ 0.06
SYN1P17600 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SYN1P17600 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.4■□□□□ 0.06
SYN1P17600 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYN1P17600 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYN1P17600 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYN1P17600 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYN1P17600 LINC00554-201ENST00000564841 3011 ntBASIC15.39■□□□□ 0.05
SYN1P17600 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SYN1P17600 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms