Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.02■□□□□ 0.16
CYP3A4P08684 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.02■□□□□ 0.16
CYP3A4P08684 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.02■□□□□ 0.16
CYP3A4P08684 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.02■□□□□ 0.16
CYP3A4P08684 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.02■□□□□ 0.16
CYP3A4P08684 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.02■□□□□ 0.16
CYP3A4P08684 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.02■□□□□ 0.16
CYP3A4P08684 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.02■□□□□ 0.16
CYP3A4P08684 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.02■□□□□ 0.16
CYP3A4P08684 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.02■□□□□ 0.16
CYP3A4P08684 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.02■□□□□ 0.16
CYP3A4P08684 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.02■□□□□ 0.16
CYP3A4P08684 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.02■□□□□ 0.16
CYP3A4P08684 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CYP3A4P08684 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYP3A4P08684 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.02■□□□□ 0.16
CYP3A4P08684 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CYP3A4P08684 AC009145.4-201ENST00000625119 1294 ntBASIC16.02■□□□□ 0.16
CYP3A4P08684 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CYP3A4P08684 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CYP3A4P08684 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CYP3A4P08684 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.02■□□□□ 0.15
CYP3A4P08684 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CYP3A4P08684 KRT8P43-201ENST00000406052 1458 ntBASIC16.02■□□□□ 0.15
CYP3A4P08684 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CYP3A4P08684 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CYP3A4P08684 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.02■□□□□ 0.15
CYP3A4P08684 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CYP3A4P08684 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.02■□□□□ 0.15
CYP3A4P08684 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.01■□□□□ 0.15
CYP3A4P08684 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.01■□□□□ 0.15
CYP3A4P08684 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.01■□□□□ 0.15
CYP3A4P08684 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.01■□□□□ 0.15
CYP3A4P08684 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 AL627422.1-201ENST00000434104 580 ntBASIC16.01■□□□□ 0.15
CYP3A4P08684 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 AC098934.1-203ENST00000442868 1262 ntBASIC16.01■□□□□ 0.15
CYP3A4P08684 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.01■□□□□ 0.15
CYP3A4P08684 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.01■□□□□ 0.15
CYP3A4P08684 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.01■□□□□ 0.15
CYP3A4P08684 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.01■□□□□ 0.15
CYP3A4P08684 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 RN7SL81P-201ENST00000493781 261 ntBASIC16.01■□□□□ 0.15
CYP3A4P08684 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.01■□□□□ 0.15
CYP3A4P08684 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.01■□□□□ 0.15
CYP3A4P08684 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.01■□□□□ 0.15
CYP3A4P08684 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CYP3A4P08684 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.01■□□□□ 0.15
CYP3A4P08684 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 AL353726.2-201ENST00000623259 884 ntBASIC16.01■□□□□ 0.15
CYP3A4P08684 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 AC068418.2-201ENST00000577309 3703 ntBASIC16.01■□□□□ 0.15
CYP3A4P08684 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 AC117489.1-201ENST00000625169 3217 ntBASIC16.01■□□□□ 0.15
CYP3A4P08684 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.01■□□□□ 0.15
CYP3A4P08684 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.01■□□□□ 0.15
CYP3A4P08684 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CYP3A4P08684 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16■□□□□ 0.15
CYP3A4P08684 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CYP3A4P08684 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CYP3A4P08684 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CYP3A4P08684 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CYP3A4P08684 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CYP3A4P08684 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CYP3A4P08684 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms