Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CD74P04233 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 AC073862.5-201ENST00000624129 2027 ntBASIC12.13□□□□□ -0.47
CD74P04233 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.13□□□□□ -0.47
CD74P04233 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.13□□□□□ -0.47
CD74P04233 MIR1233-2-201ENST00000408138 82 ntBASIC12.13□□□□□ -0.47
CD74P04233 MIR1233-1-201ENST00000408722 82 ntBASIC12.13□□□□□ -0.47
CD74P04233 TSSK5P-201ENST00000423978 907 ntBASIC12.13□□□□□ -0.47
CD74P04233 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.13□□□□□ -0.47
CD74P04233 KLF2P3-201ENST00000451977 1087 ntBASIC12.13□□□□□ -0.47
CD74P04233 INE1-201ENST00000456273 945 ntBASIC12.13□□□□□ -0.47
CD74P04233 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.13□□□□□ -0.47
CD74P04233 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.13□□□□□ -0.47
CD74P04233 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.13□□□□□ -0.47
CD74P04233 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.13□□□□□ -0.47
CD74P04233 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.13□□□□□ -0.47
CD74P04233 AC124283.3-201ENST00000570869 594 ntBASIC12.13□□□□□ -0.47
CD74P04233 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CD74P04233 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.13□□□□□ -0.47
CD74P04233 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CD74P04233 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 AL390955.2-201ENST00000603032 514 ntBASIC12.13□□□□□ -0.47
CD74P04233 AL158211.3-201ENST00000607385 239 ntBASIC12.13□□□□□ -0.47
CD74P04233 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 Z92544.3-201ENST00000624747 417 ntBASIC12.13□□□□□ -0.47
CD74P04233 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 AP003969.2-201ENST00000623739 2275 ntBASIC12.13□□□□□ -0.47
CD74P04233 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.13□□□□□ -0.47
CD74P04233 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
CD74P04233 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.12□□□□□ -0.47
CD74P04233 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 PCDHB19P-202ENST00000625133 2914 ntBASIC12.12□□□□□ -0.47
CD74P04233 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 MEX3B-202ENST00000558133 4333 ntBASIC12.12□□□□□ -0.47
CD74P04233 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.12□□□□□ -0.47
CD74P04233 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.12□□□□□ -0.47
CD74P04233 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD74P04233 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms