Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
IFNA1P01562 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.43□□□□□ -0.58
IFNA1P01562 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 ABCD1P2-201ENST00000429313 1601 ntBASIC11.43□□□□□ -0.58
IFNA1P01562 LINC01165-201ENST00000445190 1623 ntBASIC11.43□□□□□ -0.58
IFNA1P01562 AL158070.2-201ENST00000623713 1621 ntBASIC11.43□□□□□ -0.58
IFNA1P01562 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
IFNA1P01562 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
IFNA1P01562 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 AC079776.4-201ENST00000511039 504 ntBASIC11.43□□□□□ -0.58
IFNA1P01562 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
IFNA1P01562 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.43□□□□□ -0.58
IFNA1P01562 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 AC000095.1-201ENST00000603208 874 ntBASIC11.43□□□□□ -0.58
IFNA1P01562 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 AC015818.9-201ENST00000591705 4582 ntBASIC11.43□□□□□ -0.58
IFNA1P01562 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 AP001972.5-201ENST00000624624 2338 ntBASIC11.43□□□□□ -0.58
IFNA1P01562 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.43□□□□□ -0.58
IFNA1P01562 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
IFNA1P01562 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
IFNA1P01562 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
IFNA1P01562 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.42□□□□□ -0.58
IFNA1P01562 AL445250.1-201ENST00000641671 2259 ntBASIC11.42□□□□□ -0.58
IFNA1P01562 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
IFNA1P01562 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.42□□□□□ -0.58
IFNA1P01562 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
IFNA1P01562 SPCS2P4-201ENST00000436160 681 ntBASIC11.42□□□□□ -0.58
IFNA1P01562 RPL13P2-201ENST00000440687 659 ntBASIC11.42□□□□□ -0.58
IFNA1P01562 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms