Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.26■□□□□ 0.51
CHL1O00533 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHL1O00533 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.26■□□□□ 0.51
CHL1O00533 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.26■□□□□ 0.51
CHL1O00533 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHL1O00533 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHL1O00533 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.26■□□□□ 0.51
CHL1O00533 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHL1O00533 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CHL1O00533 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHL1O00533 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHL1O00533 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC18.26■□□□□ 0.51
CHL1O00533 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHL1O00533 KRT8P24-201ENST00000560290 1559 ntBASIC18.25■□□□□ 0.51
CHL1O00533 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHL1O00533 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CHL1O00533 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHL1O00533 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.25■□□□□ 0.51
CHL1O00533 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC18.25■□□□□ 0.51
CHL1O00533 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.25■□□□□ 0.51
CHL1O00533 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CHL1O00533 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.25■□□□□ 0.51
CHL1O00533 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.25■□□□□ 0.51
CHL1O00533 AP002803.1-201ENST00000528836 498 ntBASIC18.25■□□□□ 0.51
CHL1O00533 TMCO5B-205ENST00000530020 894 ntBASIC18.25■□□□□ 0.51
CHL1O00533 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CHL1O00533 AC138701.2-201ENST00000553634 226 ntBASIC18.25■□□□□ 0.51
CHL1O00533 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.25■□□□□ 0.51
CHL1O00533 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.25■□□□□ 0.51
CHL1O00533 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.25■□□□□ 0.51
CHL1O00533 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 TBC1D27-202ENST00000424239 1573 ntBASIC18.25■□□□□ 0.51
CHL1O00533 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 LINC01230-201ENST00000625222 3017 ntBASIC18.25■□□□□ 0.51
CHL1O00533 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CHL1O00533 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHL1O00533 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.24■□□□□ 0.51
CHL1O00533 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.24■□□□□ 0.51
CHL1O00533 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHL1O00533 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHL1O00533 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.24■□□□□ 0.51
CHL1O00533 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHL1O00533 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 PYY2-201ENST00000315776 282 ntBASIC18.24■□□□□ 0.51
CHL1O00533 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHL1O00533 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.24■□□□□ 0.51
CHL1O00533 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC18.24■□□□□ 0.51
CHL1O00533 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHL1O00533 AC007952.4-201ENST00000573866 637 ntBASIC18.24■□□□□ 0.51
CHL1O00533 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
CHL1O00533 AC005041.3-201ENST00000606287 649 ntBASIC18.24■□□□□ 0.51
CHL1O00533 AC007250.1-201ENST00000608934 338 ntBASIC18.24■□□□□ 0.51
CHL1O00533 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHL1O00533 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHL1O00533 AC138761.6-201ENST00000583997 1423 ntBASIC18.23■□□□□ 0.51
CHL1O00533 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC18.23■□□□□ 0.51
CHL1O00533 AL928654.5-201ENST00000624831 2501 ntBASIC18.23■□□□□ 0.51
CHL1O00533 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHL1O00533 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHL1O00533 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms