Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 AL109809.1-201ENST00000418979 1367 ntBASIC14.01□□□□□ -0.17
C4orf47A7E2U8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 PTGER4P2-201ENST00000328411 252 ntBASIC14.01□□□□□ -0.17
C4orf47A7E2U8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 PTGER4P3-201ENST00000458150 252 ntBASIC14.01□□□□□ -0.17
C4orf47A7E2U8 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 IGHEP1-201ENST00000521393 651 ntBASIC14.01□□□□□ -0.17
C4orf47A7E2U8 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 AL591471.1-201ENST00000621855 229 ntBASIC14.01□□□□□ -0.17
C4orf47A7E2U8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 AL591122.2-201ENST00000624125 1853 ntBASIC14.01□□□□□ -0.17
C4orf47A7E2U8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 AC126365.1-201ENST00000578585 1514 ntBASIC14□□□□□ -0.17
C4orf47A7E2U8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14□□□□□ -0.17
C4orf47A7E2U8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
C4orf47A7E2U8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14□□□□□ -0.17
C4orf47A7E2U8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
C4orf47A7E2U8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14□□□□□ -0.17
C4orf47A7E2U8 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 BRD7P5-201ENST00000299197 1822 ntBASIC14□□□□□ -0.17
C4orf47A7E2U8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14□□□□□ -0.17
C4orf47A7E2U8 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
C4orf47A7E2U8 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
C4orf47A7E2U8 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14□□□□□ -0.17
C4orf47A7E2U8 AC023141.7-201ENST00000430646 407 ntBASIC14□□□□□ -0.17
C4orf47A7E2U8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14□□□□□ -0.17
C4orf47A7E2U8 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14□□□□□ -0.17
C4orf47A7E2U8 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14□□□□□ -0.17
C4orf47A7E2U8 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
C4orf47A7E2U8 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14□□□□□ -0.17
C4orf47A7E2U8 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14□□□□□ -0.17
C4orf47A7E2U8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14□□□□□ -0.17
C4orf47A7E2U8 AC068831.5-201ENST00000557387 328 ntBASIC14□□□□□ -0.17
C4orf47A7E2U8 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14□□□□□ -0.17
C4orf47A7E2U8 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14□□□□□ -0.17
C4orf47A7E2U8 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14□□□□□ -0.17
C4orf47A7E2U8 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 PTPN20CP-201ENST00000614090 920 ntBASIC14□□□□□ -0.17
C4orf47A7E2U8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14□□□□□ -0.17
C4orf47A7E2U8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
C4orf47A7E2U8 AGGF1P1-201ENST00000509500 2073 ntBASIC14□□□□□ -0.17
C4orf47A7E2U8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14□□□□□ -0.17
C4orf47A7E2U8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14□□□□□ -0.17
C4orf47A7E2U8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 264.6 ms