Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AC018735.1-201ENST00000437208 1502 ntBASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 ACTBP8-201ENST00000403258 1108 ntBASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 SAMD11P1-201ENST00000571429 661 ntBASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AC138969.2-201ENST00000532739 9932 ntBASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AC023794.5-201ENST00000564380 2157 ntBASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 EIF3FP3-201ENST00000434851 1086 ntBASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 PFN1P12-201ENST00000455938 534 ntBASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 RPSAP36-202ENST00000494591 1261 ntBASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 AC023310.1-201ENST00000554836 735 ntBASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX49Q9Y6V7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX49Q9Y6V7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms