Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AC005840.4-201ENST00000541242 2494 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AC010327.5-201ENST00000586923 3061 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 KHSRPP1-201ENST00000427983 1768 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AL359881.3-201ENST00000602640 1721 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AC004945.1-201ENST00000416738 983 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 CD8B2-202ENST00000417670 633 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AC007551.1-201ENST00000457394 519 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AP005018.1-201ENST00000525475 301 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 KRT90P-201ENST00000549264 1064 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 SORD2P-201ENST00000558556 1069 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 BX088702.1-201ENST00000610784 235 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AC244669.2-201ENST00000612320 853 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AP001002.3-201ENST00000623482 206 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 TCAM1P-207ENST00000485295 1537 ntBASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
POLR1DQ9Y2S0 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 AC020910.6-201ENST00000623084 1459 ntBASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 AC016397.2-201ENST00000624848 1985 ntBASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.96□□□□□ -0.34
POLR1DQ9Y2S0 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms