Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 AL928654.5-201ENST00000624831 2501 ntBASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 AL138725.1-201ENST00000407347 1314 ntBASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AL022313.4-201ENST00000562756 2046 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AC024075.2-201ENST00000598112 1473 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AC073869.1-201ENST00000415574 2762 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 RNU1-114P-201ENST00000365297 166 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AL139400.1-201ENST00000366220 510 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 ZNF890P-202ENST00000530367 1156 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AC004835.2-201ENST00000603762 682 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AC004840.1-201ENST00000636359 365 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AC064801.2-201ENST00000625052 1303 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 AL805961.2-201ENST00000642139 4817 ntBASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RCL1Q9Y2P8 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
RCL1Q9Y2P8 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
RCL1Q9Y2P8 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.83□□□□□ -0.51
RCL1Q9Y2P8 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
RCL1Q9Y2P8 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 AC073957.3-201ENST00000609998 6758 ntBASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RCL1Q9Y2P8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms